Plant & Animal Genomes XI Conference

January 11-15, 2003
Town & Country Convention Center
San Diego, CA

Poster: General Comparative
            

COMPARISON OF ARABIDOPSIS VS. YEAST, HUMAN, AND WORM GENOMES

Allometra, 2604 Kalamazoo Place, Davis, CA 95616, USA

Arabodopsis encoded proteins were compared with S. cerevisiae, human, and C. elegans proteins. We used the publicly available annotations from TIGR (Arabidopsis) and NCBI (yeast, human, and worm). Our software package PyMood was used for the comparative analysis and data visualization. Arabidopsis specific proteins, proteins shared only between Arabidopsis and one or two other genomes, and the proteins shared between all four genomes have been identified. The project description and the lists of the extracted proteins are available for download at http://allometra.com/arabidopsis.shtml