PAG-VI: CONSTRUCTION OF A HORSE BAC LIBRARY FOR CYTOGENETICAL ASSIGNATION OF TYPE I AND TYPE II MARKERS

PAG-VI  Plant & Animal Genome VI Conference

Town & Country Hotel, San Diego, CA, January 18-22, 1998.


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CONSTRUCTION OF A HORSE BAC LIBRARY FOR CYTOGENETICAL ASSIGNATION OF TYPE I AND TYPE II MARKERS.

Sophie Godard, Laurent Schibler, Anne Oustry, Edmond Cribiu, GÉRARD GUÉRIN

    Laboratoire de Génétique Biochimique et de Cytogénétique, INRA, Centre de Recheches de Jouy, 78350 Jouy-en-Josas, FRANCE.

Compared with other domestic species, mapping of the horse genome is in its early stage. The international effort to construct a low density genetic map is well under way with the exchange, typing and linkage analysis of reference families. In addition to this map, there is a need for physical mapping to obtain an integrated map in a short period of time. BAC libraries are considered to be a powerful tool to reach this objective. A horse BAC library of about 40 000 clones was thus constructed and characterized. The inserts have a mean size of 110kb representing a coverage of 1.5 genome equivalent and the probability of finding a single sequence is about 75%. The library was screened with type I primers designed from sequences retrieved from international databases and type II primers from plasmid-derived microsatellites produced in our laboratory. The corresponding inserts were cytogenetically localized by FISH using R banding. Results were consistent with published human-horse Zoo-FISH and allowed the assignation and/or orientation of some known linkage groups and the localization of a few genes.


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