PAG-II Plant Genome II Conference

Town & Country Conference Center, San Diego, CA, January, 1994.


PG-II: IDENTIFICATION OF A CALRETICULIN HOMOLOGOUS GENE IN PLANTS: DEVELOPMENTAL REGULATION AND AMINO ACID SEQUENCE DEDUCED FROM cDNA

IDENTIFICATION OF A CALRETICULIN HOMOLOGOUS GENE IN PLANTS: DEVELOPMENTAL REGULATION AND AMINO ACID SEQUENCE DEDUCED FROM cDNA.

F.Q. Chen, P.M. Hayes, D. Mulrooney, and A. Pan, Dept. of Crop and Soil Science, Oregon State University, Corvallis, OR 97331-3002.


A 1450 bp cDNA clone more than 60% homologous to the nucleotide sequences of animal calreticulin, a calcium binding protein with both high affinity low capacity and low affinity high capacity binding sites, was identified from a 3 day old fertilized ovary cDNA library of barley (Hordeum vulgare L.) through differential screening. The expression of the gene was considerably elevated after fertilization, but the elevation was attenuated by the selective chromosome elimination in the interspecific hybridization of Hordeum vulgare x Hordeum bulbosum. The cDNA clone has an open reading frame that encodes an acidic protein of 368 residues with a mol. wt. of 41,931 daltons. The deduced amino acid sequence shares more than 50% of homology with animal calreticulin and has a considerable amount of conservative residue substitution. Like animal calreticulin, the deduced amino acid sequence displays the three zone characteristic: the nearly neutral N terminal region, the praline rich central region with internal repeats of AKKPEDWDD, and the polyacidic C terminal region. However, compared to animal calreticulin, the aspartic acid residue is more predominant than the glutamic acid residue in the polyacidic C terminal region, and the ER retention signal sequence is HDEL instead of KDEL. The results support the ubiquitous nature of calreticulin and also reveal the marked difference in the deduced animo acid sequences between animal and plant.


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