PAG-II Plant Genome II Conference

Town & Country Conference Center, San Diego, CA, January, 1994.


PG-II: ASSESSMENT OF NUCLEAR RFLPs AS A TAXONOMIC TOOL IN ALLIUM SECTION CEPA (ALLIACEAE)

ASSESSMENT OF NUCLEAR RFLPs AS A TAXONOMIC TOOL IN ALLIUM SECTION CEPA (ALLIACEAE).

James M. Bradeen, Ockyung Bark, and Michael J. Havey, USDA-ARS, Department of Horticulture, University of Wisconsin, Madison, WI 53706.


Alliwn cepa (bulb onion), A. fistulosum (Japanese bunching onion) and six wild species have been classified as members of two distinct sections, Cepa and Phyllodolon, and as members of a composite section Cepa. Maternal phylogenies estimated by restriction enzyme analysis of the chloroplast DNA confidently delineated a clade containing A. cepa, A. fistuloswn, A. altaicwn, A. galanthum and A. vavilovii. We assessed the ability of nuclear RFLPs to more thoroughly clarify relationships among and within these species. While the maternal phylogeny did not resolve affinities among these five species, nuclear RFLPs identified three distinct informal groups, the Cepa, Altaicum, and Galanthum Groups. Several distance analyses were used and all identified the same three major informal groups. Nuclear RFLPs provided no evidence for the division of these accessions into two sections. Within the Cepa Group, both long day and short day A. cepa culfivars from around the world were surveyed. Comparatively few nuclear RFLPs were identified. Nuclear RFLPs reflected known germplasm origins and suggested the long day storage onion possesses a narrower genetic background than the short day onion. One possible interpretation is that the short day onion represents a progenitor state, with the long day onion having been selected for production at higher latitudes. Given the considerable nuclear variation observed among related species in section Cepa, nuclear RFLPs are appropriate to resolve taxonomic issues within a single species or among closely related species in Allium section Cepa.


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