International PAG Forest Trees Workshop

Forest Trees Workshop Sunday - All day, 13 January 2008 --- 8:00 am - 6:20 pm

Forest Trees Workshop - Sunrise Room

Organizers: Matias Kirst, University of Florida

(mkirst@ufl.edu)

and

Nathalie Isabel, Canadian Forest Service

(nisabel@cfl.forestry.ca)

and

Alexander Myburg, University of Pretoria

(zander.myburg@fabi.up.ac.za)

(This workshop is also the annual meeting of the International Union of Forestry Research Organizations): (http://iufro.boku.ac.at/iufro/iufronet/d2/hp20410.htm)

Speakers:

8:00am
"Introduction"

Sequencing & New Technologies

1. 8:15am
Dario Grattapaglia , EMBRAPA Genetic Resources and Biotechnology (dario@cenargen.embrapa.br)
"Single feature polymorphism discovery and validation in Eucalyptus by pseudo-testcross inheritance and mapping"

2. 8:30am
Evandro Novaes , University of Florida (evandro@ufl.edu)
"Revealing allelic variation in ESTs of Eucalyptus grandis with massively parallel pyrosequencing"

3. 8:45am
Ross W. Whetten , North Carolina State University (ross_whetten@ncsu.edu)
"Discovering genes and polymorphisms in Fraser Fir by parallel sequencing of PCR-based libraries"

4. 9:00am
Georgios J. Pappas, EMBRAPA Genetic Resources and Biotechnology (gpappas@cenargen.embrapa.br)
"Individual and pooled Eucalyptus BAC clone sequencing and assembly by high throughput pyrosequencing "

5. 9:15am
Richard Cronn , USDA Forest Service - Pacific Northwest Research Station (rcronn@fs.fed.us)
"Massively parallel sequencing of chloroplast genomes: an example from Pinus"

Functional Genomics A

6. 9:45am
John MacKay, Laval University (jmackay@rsvs.ulaval.ca)
"Large-Scale cDNA sequencing and transcript profiling to discover candidate genes for wood formation and adaptation in conifer trees"

7. 10:00am
Danilo D. Fernando, State University of New York (fernando@esf.edu)
"Towards our understanding of the mechanism of pollen tube growth and development in conifers"

8. 10:15am
Øystein Johnsen , Norwegian Forest and Landscape Institute (oystein.johnsen@skogoglandskap.no)
"Differential gene expression during early development in Norway Spruce related to cold And warm maternal embryo environment"

9. 10:30am
Palitha Dharmawardhana, Oregon State University (Palitha@oregonstate.edu)
"Global transcript profiling of Populus trichocarpa during the transition from stem elongation to secondary growth"

Functional Genomics B

10. 11:00am
Yanghuan Bao, Oregon State University (Yang.Bao@oregonstate.edu)
"Genome-scale transcriptome analysis of in vitro shoot organogenesis in Poplar"

11. 11:15
Marie-Claude Nicole, Natural Resources Canada, Laurentian Forestry Centre (mcnicole@cfl.forestry.ca)
"Organ-specific and pathogen inducible expression profiles of Poplar map kinase kinases (Ptmkks) and map kinase (Ptmpks)"

12. 11:30
Gail Taylor, University of Southampton (gt1@soton.ac.uk)
"Gene expression in Populus, during delayed autumnal senescence in elevated carbon dioxide, reveals up-regulation of the anthocyanin bosynthetic pathway"

13. 11:45am
Steven H. Strauss, Oregon State University (Steve.Strauss@oregonstate.edu)
"Highly stable transgene expression and RNAi suppression in a large population of field grown poplars"

Integrative Genomics

14. 1:30pm
Véronique Jorge, INRA Orleans (jorge@orleans.inra.fr)
"Genetical genomics applied to characterization of poplar resistance to Melampsora larici-populina"

15. 1:45pm
Rebecca Dauwe, University of British Columbia (rdauwe@forestry.ubc.ca)
"Elucidating weevil resistance in interior Spruce by global metabolite profiling"

16. 2:00pm
Jason A. Holliday, University of British Columbia (jah1@interchange.ubc.ca)
"Genomics of adaptation to local climate in Sitka Spruce"

17. 2:15pm
Catherine I. Benedict, University of Florida (cbenedict@ufl.edu)
"eQTL mapping identifies genes that co-localize with QTL controlling carbon partitioning and allocation in Populus"

Population and Association Genetics

18. 2:45
Jennifer M. Lee , UC Davis (jzlee@ucdavis.edu)
"Allele discovery of economic Pine Traits II - SNP discovery"

19. 3:00pm
Andrew J. Eckert, UC Davis (ajeckert@ucdavis.edu)
"Patterns of population structure and historical demographic inference for Loblolly Pine"

20. 3:15pm
Sreenath R. Palle, Texas A&M University (sreesree14@yahoo.com)
"Gene expression analysis in an association population of Loblolly Pine "

21. 3:30pm
Shannon K. Dillon , CSIRO (Shannon.DIllon@CSIRO.au)
"Association studies in P. radiata: Recent findings and future considerations "

22. 3:45pm
Barnaly Pande, UC Davis (bpande@ucdavis.edu)
"Association genetics of 100 candidate genes involved in adaptation-related cold tolerance in Douglas-Fir"

23. 4:00pm
Jill Wegrzyn, UC Davis (jlwegrzyn@ucdavis.edu)
"Discovery of genes for improved cellulose and cellulose-extractability from Poplar secondary xylem"

New Genome Sequencing Projects

24. 4:15pm
Alexander A. Myburg, , University of Pretoria (zander.myburg@fabi.up.ac.za)
"Sequencing the Eucalyptus genome: Genomic resources for renewable energy and fiber production"

25. 4:30pm
Dario Grattapaglia, EMBRAPA Genetic Resources and Biotechnology (dario@cenargen.embrapa.br)
"Sequencing the Eucalyptus grandis genome: A microsatellite survey shows maintenance of heterozygosity in the target, partially inbred, genome"

7:00pm

Conifer Genome Sequencing Discussion: Strategy and Toll Development


Dana Nelson, USDA-Forest Service (dananelson@fs.fed.us)
"Pine physical mapping and genome sequencing"

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This page last updated Monday, 26-Nov-2007 16:32:44 EST