Computer Demonstrations

Computer database and software demonstrations will be conducted all week in the "computer room", located in the California Room.

Sunday - Late Afternoon, January 14, 2007 -- 3:35 pm - 5:45 pm

3:35 pm
Genome Database for Rosaceae (GDR)
Sook Jung et al.
[sookjc@gmail.com]
Clemson Unversity, Clemson SC

3:55 pm
The Rice Annotation Project Database (RAP-DB): Repository of Oryza sativa ssp. japonica Genome Information
Tsuyoshi Tanaka et al.
[tstanaka@affrc.go.jp]
National Institute of Agrobiological Sciences, Tsukuba, Japan

4:15 pm
The New ArkDB Database
Andy Law et al.
[Andy.Law@bbsrc.ac.uk]
Roslin Institute, Roslin, Scotland

4:35 pm
MaizeGDB's New Data Types, Resources, and Activities
Carolyn Lawrence et al.
[triffid@iastate.edu]
USDA-ARS, Ames IA

4:55 pm
The Legume Information System (LIS): An Integrated, Dynamic Comparative Legume Information Resource
Michael Gonzales et al.
[mg@ncgr.org]
National Center for Genome Resources, Santa Fe NM

5:15 pm
The Soybean Genome Database (SoyGD): A Tool for Integrated Legume Biology
David Lightfoot et al.
[ga4082@siu.edu]
Southern Illinois University, Carbondale IL

5:35 pm
The Fusarium virguliforme Genome Database (FVGD): A Tool for Integrated Pathogen Biology
David Lightfoot et al.
[ga4082@siu.edu]
Southern Illinois University, Carbondale IL

Monday - Early Afternoon, January 15, 2007 -- 12:50 pm - 3:00 pm

12:50 pm
The TriAnnotPipeline for Wheat BAC Automatic Annotation
Philippe Leroy et al.
[leroy@clermont.inra.fr]
INRA, Clermont-Ferrand, France

1:10 pm
HarvEST: A Portable and Companion Online Browser for Genome Research
Timothy Close et al.
[timothy.close@ucr.edu]
University of California, Riverside CA

1:30 pm
Blast2GO V.2: A Comprehensive Functional Annotation and Analysis Tool for the Genomics of Non-Model Species
Ana Conesa et al.
[aconesa@ivia.es]
Instituto Valenciano de Investigaciones Agrarias, València, Spain

1:50 pm
Tomato Analyzer, a User-friendly Software Application for Analyzing Two-dimensional Fruit Shapes
Esther van der Knaap et al.
[vanderknaap.1@osu.edu]
Ohio State University, Wooster OH

2:10 pm
Demonstration of New Software of QTLNetwork and ClusterProject
Jun Zhu
[jzhu@zju.edu.cn]
Zhejiang University, Hangzhou, China

2:30 pm
PLEXdb: Plant and Pathogen Expression Database and Tools for Comparative and Functional Genomics Analysis
Ethalinda Cannon et al.
[ekcannon@iastate.edu]
Iowa State University, Ames IA

2:50 pm
Mapdisto, A Free User-Friendly Computer Program For Computing Genetic Maps
Mathias Lorieux
[m.lorieux@gmail.com]
IRD/CIAT, Cali, Colombia

Wednesday - Mid Afternoon, January 17, 2007 -- 2:20 pm - 4:30 pm

2:40 pm
Animal QTLdb: Beyond a Repository. A Public Platform for QTL Comparisons and Integration with Diverse Types of Structural Genomic Information
Zhi-Liang Hu et al.
[zhu@iastate.edu]
Iowa State University, Ames IA

3:00 pm
Vocabularies and Ontologies as Data Integration Tools in the Mouse Genome Informatics Resource
Susan Bello et al.
[smb@informatics.jax.org]
Jackson Laboratory, Bar Harbor ME

3:20 pm
Web Interface for Accessing Bioinformatics Tools on Parallel Windows Cluster
Jaroslaw Pillardy et al.
[jp86@cornell.edu]
Cornell University, Ithaca NY

3:40 pm
Virtual Plant Information Network (VPIN)
Damian Gessler et al.
[ddg@ncgr.org]
National Center for Genome Resources, Santa Fe NM

4:00 pm
Plant Genomic Resources at National Center for Biotechnology Information
Brian Smith-White et al.
[smtwhite@ncbi.nlm.nih.gov]
National Center for Biotechnology Information, Bethesda MD

4:20 pm
Reactome: Expression Analysis Using an Integrated Pathway Knowledgebase
Carl Schmidt et al.
(schmidtc@UDel.Edu)
University of Delaware, Newark DE

Should you wish to demo any computer system and/or present an "electronic poster" during the meeting, please submit an abstract for "Computer Demonstration" on the Abstract submissions form. Selecting this option will provide you with the option of solely presenting the "Demonstration Only" or to present a "Demonstration and Poster".

Please note that any software which is demonstrated at PAG-XV must be available to the scientific community (either as freeware or shareware).

It is expected that at least 20 computers will be available in the California Room for e-mail, telnet, and web access.

Click here to go back to the PAG Table of Contents

Friday, 08-Dec-2006 12:54:03 EST