Computer Demonstrations

Computer database and software demonstrations will be conducted all week in the "computer room", located in the California Room.

Sunday - Late Afternoon, January 16, 2005 -- 4:10 pm - 6:20 pm

4:10 PM
Public Domain Genome/Proteome Analysis Resources at EBI
Sandra Orchard and Rolf Apweiler
(orchard@ebi.ac.uk)
EMBL-European Bioinformatics Institute, Cambridge, UK

4:30 PM
Web Presentation of Plant Genome Resources at NCBI
Brian Smith-White et al.
(smtwhite@ncbi.nlm.nih.gov)
National Center for Biotechnology Information, Bethesda MD

4:50 PM
Gramene: A Comparative Mapping Resource for the Grasses
Molly Fogleman et al.
(mam94@cornell.edu)
Cornell University, Ithaca NY

5:10 PM
The International Rice Information System (IRIS): An Evolving Resource Cross-Linking Rice Germplasm, Phenotype, Genomics and Genotype Information
Richard Bruskiewich et al.
(r.bruskiewich@cgiar.org)
International Rice Research Institute (IRRI), Los Baņos, Philippines

5:30 PM
MaizeGDB Community Curation Tools
Carolyn Lawrence et al.
(triffid@iastate.edu)
Iowa State University, Ames IA

5:50 PM
BarleyBase -- Putting Large-Scale Plant Expression Profiling Data into a Functional Genomics Context
Lishuang Shen et al.
(lshen@iastate.edu)
Iowa State University, Ames IA

6:10 PM
Empirical Evaluation of PathBinderH
LaRon M. Hughes
(laron@iastate.edu)
Iowa State University, Ames IA

Monday - Early Afternoon, January 17, 2005 -- 12:50 pm - 3:00 pm

12:50 PM
The Genome Browser for Soybean: Displaying a Sequence Framework and Physical Map
David Lightfoot et al.
(ga4082@siu.edu)
Southern Illinois University, Carbondale IL

1:10 PM
SynBrowse: A Synteny Browser for Comparative Sequence Analysis
Xiaokang Pan et al.
(xpan@iastate.edu)
Iowa State University, Ames IA

1:30 PM
The Bovine QTL Viewer: A Web Accessible Database of Bovine Quantitative Trait Loci
David Adelson et al.
(david.adelson@tamu.edu)
Texas A&M University, College Station TX

1:50 PM
The Legume Information Resource (LIS): An Integrated Information Resource for Comparative Legume Biology
Michael Gonzales et al.
(mg@ncgr.org)
National Center for Genome Resources, Santa Fe NM

2:10 PM
The Phytophthora Functional Genomics Database (PFGD)
Kamal Gajendran et al.
(kg@ncgr.org)
National Center for Genome Resources, Santa Fe NM

2:30 PM
The PowerAtlas: A Power and Sample Size Atlas for Microarray Research Based Upon 458 Public Datasets
Grier Page et al.
(gpage@uab.edu)
University of Alabama, Birmingham AL

2:40 PM
GGT: Software for Visualization of Graphical Genotypes
Ralph van Berloo
(ralph.vanberloo@wur.nl)
Wageningen University, Wageningen, The Netherlands

Wednesday - Mid Afternoon, January 19, 2004 -- 2:20 pm - 4:30 pm

2:20 PM
PlantTribes: A Global Classification for Arabidopsis and Rice Proteins
Kerr Wall et al.
(pkerrwall@psu.edu)
Pennsylvania State University, University Park PA

2:40 PM
TASSEL: A Database-Aware Tool for Association & Diversity Analysis
Dallas Kroon et al.
(dek29@cornell.edu)
USDA-ARS, Cornell University, Ithaca NY

3:00 PM
BIRCH: A Network-Accessible Bioinformatics Platform
Brian Fristensky
(frist@cc.umanitoba.ca)
University of Manitoba, Winnipeg, CA

3:20 PM
LUCY2: An Interactive DNA Sequence Quality Trimming and Vector Removal Tool
Song Li and Hui-Hsien Chou
(lisong@iastate.edu)
Iowa State University, Ames IA

3:40 PM
Easy Perl Programming Using VECT: The Visual Extraction and Conversion Tool
Hui-Hsien Chou
(hhchou@iastate.edu)
Iowa State University, Ames IA

4:00 PM
GRAMA: Genetic Mapping Analysis of Temperature Gradient Capillary Electrophoresis (TGCE) Data
Hui-Hsien Chou et al.
(hhchou@iastate.edu)
Iowa State University, Ames IA

4:20 PM
Multilocus Consensus Genetic Maps: Formulation, Algorithms, and Results
Abraham Korol et al.
(korol@esti.haifa.ac.il)
University of Haifa, Haifa, IL

Should you wish to demo any computer system and/or present an "electronic poster" during the meeting, please submit an abstract for "Computer Demonstration" on the Abstract submissions form. Selecting this option will provide you with the option of solely presenting the "Demonstration Only" or to present a "Demonstration and Poster".

Please note that any software which is demonstrated at PAG-XIII must be available to the scientific community (either as freeware or shareware).

It is expected that at least 20 computers will be available in the California Room for e-mail, telnet, and web access.

Click here to go back to the PAG Table of Contents

Tuesday, 22-Mar-2005 13:53:59 EST