International PAG -Phylogenetics and Genomics Workshop

Monday Evening, 13 January 2003 --- 7:30 pm - 10:15 pm

Phylogenetics Genomics Workshop

- Pacific 2 Room

Organizers: Claude dePamphilis, Penn State University

(cwd3@psu.edu)

and

Jim Leebens-Mack, Penn State

(jhl10@email.psu.edu)


Program:

Deep Gene, an NSF-sponsored Research Coordination Network (RCN) is holding a workshop/discussion session to increase productive interactions between plant genomic and phylogenetic biologists. Phylogenetic analysis is central to all interpretations of gene families and for functional comparisons among genomes, while genomics is providing unprecedented opportunities for learning about the evolutionary histories of genes, genomes, and organisms. 

Speakers:

7:30 pm - 7:35 pm        Claude dePamphilis, Penn State University

(cwd3@psu.edu)
Introductory Remarks

7:35 pm - 7:55 pm Brent Mishler, University of California - Berkeley

(bmishler@socrates.berkeley.edu)
Deep Gene and the Plant Genome Initiative

7:55 pm - 8:20 pm Tom Mitchell-Olds, Max Planck Institute of Chemical Ecology

(tmo@ice.mpg.de)
TBA

8:20 pm - 8:45 pm Vic Albert,University of Oslo

(victor.albert@nhm.uio.no)
Parsimony Analysis of Microarray Data

8:45 pm - 9:15 pm Doug Soltis, University of Florida

(dsoltis@botany.ufl.edu)
Hypothesis Testing in the Floral Genome Project

9:10 pm - 9:35 pm Toby Kellogg, University of Missouri - St. Louis

(tkellogg@umsl.edu)
Strengths and Weaknesses of a Candidate Gene Approach to the Evolution of Development

9:35 pm - 10:15 pm

Panel Discussion of Phylogenomics and Ontology

PANEL DISCUSSION ON THE INTEGRATION OF PHYLOGENETICS AND GENOMICS The integration of genomics and phylogenetics provides powerful analytical tools for elucidation of natural experiments that have influenced the evolution of gene function, developmental pathways and whole genomes. Unlike similarity-based analyses, which are often done as pairwise comparison, a phylogenetic approach to genomics includes explicit inference of ancestral and derived characteristics, and phylogenetic history at multiple, nested levels of comparison. The panel will discuss how available phylogenetic tools have been used to understand extant genome-related processes and drive the development of phylogenetically grounded ontologies for the description of genes, morphological structures, and phenotypic traits (characters) . Future directions for the integration of genomics and phylogenetics will be explored as the panel and audience exchange questions and comments. The Workshop is sponsored by the Deep Gene Research Coordination Group (NSF Grant DEB-0090227), which exists to integrate green plant phylogenetics and genomics. For more information, please visit our web site at: http://ucjeps.herb.berkeley.edu/bryolab/deepgene/


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This page last updated Friday, 20-Dec-2002 21:32:39 EST