PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 94pg1

MOLECULAR STUDIES OF Ac INDUCED CHROMOSOME BREAKAGE IN TOMATO

Chandler, J., Carriero, F., Blaker, N., Peterson, P., and Yoder, J.I. Department of Vegetable Crops, University of Caldomia-Davis


Xa-1 is a semidominant mutation which, when in the heterozygous condition, produces bright yellow plants. Transgenic tomato plants, bearing the maize transposable element Ac, show somatic sectoring at the Xa-1 locus. Cytological and genetic data support a model of Ac mediated chromosome breakage followed by a breakage-fusion-bridge cycle to explain the sectoring. Molecular markers flanking the Xa-1 locus are being obtained for use in studying the sectoring mechanism. We have identified 8 RFLP markers flanking the Xa-1 locus after screening 22 chromosome 10 specific probes obtained from Dr. S. Tanksley. Polymorphisms are identified at a frequency of 3% per probe enzyme combination. The 8 RFLP markers have been mapped in relation to Xa-1 in a segregating intraspecific F2 population. These markers are now being used in analysis of the sectoring. Preliminary evidence supports the breakage-fusion-bridge cycle model. In addition, RAPD markers flanking Xa-1 have been identified. The bulked segregant analysis method was used to screen the green (+/+) versus the yellow (Xa-il+) plants. No polymorphisms were detected using 200 different primers and screening approximately 1400 bands. To increase polymorphism detection, we have utilized a segregating backcross population prepared between Xa-1 and L. pennellii. In this case, 7 polymorphisms were detected using 320 primer and screening approximately 1600 bands. The frequency of polymorphic bands is 0.44%. Five of the 7 polymorphic bands have been mapped in relation to Xa-1. None of the bands are polymorphic within the L. esculentum segregating population. These markers will be used to study the sectoring mechanism if they can somehow be rendered polymorphic within L. esculentum, which must be used when studying the sectoring.


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