PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 70pg1

WHAT ARE QTL - RELATING QUANTITATIVE AND QUALITATIVE GENETIC VARIATION IN MAIZE.

M. Lee, L. Veldboom, M. Scanlon, M. James, A. M. Myers, and D. S. Robertson, IowaState University, Ames, IA 50011.


The genetic and biological basis of mst, if mt all QTL, has not been determined Robertson and others have proposed that QTL identified by linkage with molecular markers, and loci identified through genetic analysis of extreme mutant phenotypes (e.g., dwarf mutations) may be attributable to alleles at the same loci. Observations from maize isozyme and RFLP mapping studies of plant height suggest that placement of QTL often coincide with chromosome regions known to contain loci previously defined by mutant alleles with qualitative effects on height. If the quantitative effects of QTL and the qualitative effects of the mutants are indeed attributable to the same loci, mutant phenotypes induced by transposon insertion may be one of the mst efficient means of isolating genes contributing to quantitative genetic variation. Also, QTL mapping studies may provide a very efficient means of targeting loci not yet identified by an extreme mutant phenotype. Direct tests of this idea have been difficult to perform. We have used cDNA clones of known genes for starch biosynthesis and genomic sequences at, or very closely linked to transposon-tagged mutants, as RFLP probes for QTL mapping of kernel weight, plant height and insect resistance. The genomic sequences include 'Mutator-tagged sites at, or linked to defective kernel loci (dek), anther ear 1 locus (an1, a gibberellin-responsive dwarf), public maize probes near the bx1 locus (absence of cyclic hydroxamates which inhibit leaf blade feeding by European corn borer larvae). The mapping progeny consisted of 150 F2:3 lines derived from a cross of inbred lines Mol7 and H99. QTL with significant effects were detected for all traits. In general, RFLPs identified by dek clones and cDNAs related to starch biosynthesis were not associated with QTL for kernel size. However, the an1 probe was within an interval for a QTL that accounted for nearly 40% of the phenotypic variation for plant height. Probes near the bxl locus defined a QTL that accounted for 17% of the phenotypic variation for resistance to leaf blade feeding by the European corn borer. Further tests of these associations are in progress.


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