PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 6pg1

MOLECULAR TECHNIQUES AND STATISTICAL ANALYSES FOR TYPING AND CHARACTERIZATION OF PLANT INTRASPECIFIC VARIATION.

Stephen Kresovich and Warren F. Lamboy, USDA-ARS, Plant Genetic Resources Unit, Cornell, University, Geneva, NY 14456-0462.


The goal of this research is to establish strategies and techniques to detect and quantify intraspecific variation of plants at the molecular level. Theories and techniques of molecular and population genetics now may be readily integrated for establishing measures of uniqueness and variation. We are utilizing a battery of ploymerase chain reaction (PCR)-based assays for both coding (AHAS and Cab multigene families) and non-coding regions (simple, interspersed, moderately repetitive DNA) of the genome to establish: (1) individual identification, (2) measures of genetic variation, and (3) estimations of genetic relatedness. Moreover, this information, also should advance our understanding of useful genes and genotypes. We highlight aspects of technique selection and optimization, cost containment, data handling, and appropriate statistical analysis. Linked with traditional approaches to measurement of intraspecific variation, these newer methods will produce higher resolution and more rapid characterization and evaluation of ex situ and in situ plant populations. The resultant information will greatly aid efforts in agricultural and conservation sciences.


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