PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 65pg1

CO-DOMINANT INHERITANCE OF SIMPLE SEQUENCE REPEAT (SSR) GENETIC MARKERS IN SOYBEAN AND THEIR LINKAGE RELATIONSHIPS.

Mahinur S. Akkaya, Perry B. Cregan, Soybean and Alfalfa Research Lab, USDA, ARS, Beltsville, MD 20705 and James E. Specht, Department of Agronomy, University of Nebraska, Lincoln, NE 68583.


The presence of length polymorphism of Simple Sequence Repeat (SSR) DNA was demonstrated recently in our laboratory for the first time in plants. The length polymorphisms of SSRs are a result of variation in the number (n) of repeat units in SSR sequences such as (AT)n and (ATT)n. A search of soybean DNA sequences in GenBank revealed four loci containing n = 14 to 24 AT SSRs and one ATT SSR. PCR amplification of these loci using a variety of homozygous soybean genotypes in the presence of radiolabelled nucleotide and subsequent electrophoresis of these products resulted in high levels of SSR length polymorphism. Co-dominant I segregation of SSR markers with the soybean crosses of 'Williams' x 'Amsoy' and 'Jackson' x Williams was demonstrated. We have attempted to map three SSR markers, SoyABAB, SoyHSP176, and SoyPRP1, in a cross of 'Clark' x 'Harosoy' in which a number of morphological, isozyme, and RFLP markers have already been mapped. We were successful in finding linkage of the SoyHSP176 marker to one isozyme and one RFLP marker. The SoyPRP1 SSR marker was also linked to another RFLP marker.


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