PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 55pg1

RECONSTRUCTING HISTORIES OF MAIZE INBREDS USING MOLECULAR CHARACTERS.

Rhonda Honeycutt 1, Stephen Smith 2, and Bruno Sobral 1, 1 California Institute of Biological Research, 11099 North Torrey Pines Road, Ste. 300, La Jolla, CA 92037 2 Pioneer Hi-bred International, Plant Breeding Division, 7250 NW 62nd Avenue, Johnston, IA 50131-1004.


In crop species, phylogenetic relationships have been assessed on the basis of morphological, cytological, isozyme, flavonoid, or restriction fragment length polymorphism (RFLP) characters. We are using the arbitrarily primed polymerase chain reaction (AP-PCR) to generate molecular fingerprints of maize inbred lines in order to investigate statistical methods that most correctly reconstruct the known pedigree. In a blind study, 15 primers (10-mers) were used to generate over 100 AP-PCR characters scored for each of 22 inbred lines. In addition, 456 characters were generated using a total of 99 mapped RFLP probes that collectively provided a sampling along each chromosome arm for the same group of inbred lines. Here we present the analyses of these datasets independently and collectively using both phenetic and cladistic methods.


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