PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: 51pg1

THE HY3 LOCUS IN ARABIDOPSIS IS THE GENE ENCODING PHYTOCHROME B.

Jason W. Reed, Punita Nagpal, Daniel S. Pole, Masaki Furuya, and Joanne Chory, Plant Biology Laboratory, The Salk Institute, La Jolla, CA 92037, Laboratory of Plant Biological Regulation, Frontier Research Programs, RIKEN Institute, Wako-shi, Saitama 351-01, Japan.


The long hypocotyl-3(hy3) mutant of Arabidopsis thaliana was identified based on its long hypocotyl phenotype when grown in white light. It lacks some of the known red and far red light responses, and also accumulates less chlorophyll, and has fewer chloroplasts per mesophyll cell than wild-type. This suggests that the hy3 locus encodes a gene product necessary for the perception or transduction of red/far red light signals. These are known to be mediated by the phytochrome photoreceptors, which are encoded by a small family of genes in Arabidopsis. We have shown that a RFLP in the 5' untranslated region of the phytochrome B cDNA from Arabidopsis cosegregates with a hy3 mutation. Mutations in the PHYB gene have been detected in all five of the alleles examined. The mutant allele conferring the least severe hypocotyl phenotype had a missense mutation while the other more severe alleles had nonsense mutations or a T-DNA insertion. These are the first mutations shown to fall in a plant photoreceptor gene. In addition, PHYB function can be inferred from the hy3 phenotypes. Along with the phenotypes mentioned above, hy3 mutants have elongated hypocotyls, petioles, root hairs, and flowering bolts. Thus, PHYB must act in numerous tissues throughout development to affect cell elongation and physiological processes in Arabidopsis.


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