PAG-I Plant Genome I Conference

Town & Country Conference Center, San Diego, CA, November, 1992.


PG-I: AUTOMATED NUCLEIC ACID PURIFICATION OF PLANT TISSUE

AUTOMATED NUCLEIC ACID PURIFICATION OF PLANT TISSUE

Sandy M. Koepf, Takashi Fukushima and Criss Lamb, Applied Biosystems Inc., 850 Lincoln Centre Dr., Foster City, CA 94404.


Manual nucleic acid extraction is a time consuming procedure. There can be variability in the yield and quality of the nucleic acid recovered depending on the procedure and type of starting material. When the starting material is plant tissue, variability is even higher due to secondary metabolites which maybe present. Some secondary metabolites can co-purify with the nucleic acid. We have observed that high levels of secondary metabolites are associated with inhibition of restriction digestion of the DNA or the degradation of the nucleic acid. We have focused on ways to make nucleic acid purification of plant tissue more robust. One way was to automate the purification steps l by using the 341 GENEPURE (TM) Nucleic Acid Purification System by Applied Biosystems. This automated method has eliminated the run to run variability. To minimize the effects of secondary metabolites, we have investigated different chemistries on the 341.


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